miRTarVis
+
v.0.8.11
LOAD DATA
_
FILTER
_
PREDICT
_
VISUALIZE
Select Data Type
Paired Two-sample
Unpaired Two-sample
Fold Change and P-value
Multi-sample
TCGA (RNASeqV2-miRNASeq type)
Two-sample miRNA Expr. File
Two-sample mRNA Expr. File
One/Two Tailed
One Tailed T-test
Two Tailed T-test
Log Transform Before T-test
Apply Log Transform
Load Example Data Instead
Unpaired 2-cond miRNA Expr. File
Unpaired 2-cond mRNA Expr. File
T-test Type
Unequal Variance (homoscedastic)
Equal Variance (heteroscedastic)
One/Two Tailed
One Tailed T-test
Two Tailed T-test
Log Transform Before T-test
Apply Log Transform
miRNA File
ID
Fold Change
P-value
mRNA File
Gene Symbol
Fold Change
P-value
One Condition miRNA Expr. File
One Condition mRNA Expr. File
miRNA-Seq Type Files
RNASeqV2 Type Files
Load Data
Select Files Before Loading Data
0%
miRNA Summary
mRNA Summary
Data Preview (~ 1,000 data records)
Data Preview (~ 1,000 data records)
Hide miRNAs whos p-value >
Hide mRNAs whos p-value >
Hide miRNAs |fold chnage| <
Hide mRNAs |fold change| <
Hide miRNAs avg. expr lv. <
Hide mRNAs avg. expr lv. <
Filter
miRNA Summary
mRNA Summary
Data Preview (~ 1,000 data records)
Data Preview (~ 1,000 data records)
Correlation Analysis
Mutual Information
MINE
GenMiR++
TargetScan
microRNA.org
Top N Interations
Start With
TargetScan
Human
Mouse
Rat
Dog
Chicken
Chimpanzee
Rhesus
Cow
Frog
microRNA.org
Human
Mouse
Rat
FruitFly
Nematode
All Pairs
Cutoff
Correlation Type
Pearson Correlation
Spearman Correlation
Negative Correlation
Only Negative Correlation
Change Direction
No Filtering
Only Opposite Direction
Down miR-Up Gene
Up miR-Down Gene
Predict
Calculating Correlation...
0%
Top N Interations
Cutoff
Neighbor
Start With
TargetScan
Human
Mouse
Rat
Dog
Chicken
Chimpanzee
Rhesus
Cow
Frog
microRNA.org
Human
Mouse
Rat
FruitFly
Nematode
All Pairs
Change Direction
No Filtering
Only Opposite Direction
Down miR-Up Gene
Up miR-Down Gene
Predict
Calculating Mutual Information...
0%
Top N Interations
Start With
TargetScan
Human
Mouse
Rat
Dog
Chicken
Chimpanzee
Rhesus
Cow
Frog
microRNA.org
Human
Mouse
Rat
FruitFly
Nematode
All Pairs
Change Direction
No Filtering
Only Opposite Direction
Down miR-Up Gene
Up miR-Down Gene
Predict
Conducting MINE Analysis...
0%
Top N Interations
Start With
TargetScan
Human
Mouse
Rat
Dog
Chicken
Chimpanzee
Rhesus
Cow
Frog
microRNA.org
Human
Mouse
Rat
FruitFly
Nematode
Change Direction
No Filtering
Only Opposite Direction
Down miR-Up Gene
Up miR-Down Gene
Predict
Conducting GenMiR++ Analysis...
This may take a few minutes...
Species
Human
Mouse
Rat
Dog
Chicken
Chimpanzee
Rhesus
Cow
Frog
Change Direction
No Filtering
Only Opposite Direction
Down miR-Up Gene
Up miR-Down Gene
Predict
Searching TargetScan...
0%
Species
Human
Mouse
Rat
FruitFly
Nematode
Change Direction
No Filtering
Only Opposite Direction
Down miR-Up Gene
Up miR-Down Gene
Predict
Searching microRNA.org...
0%
Prediction Overview
Node Link Diagram
Treemap
Menu
Select miRNA-mRNA pairs to use them in Node Link Diagram and Treemap by clicking on a horizontal bar in the bar chart.
Save This Table
Menu
Menu
×
Enrichment Analysis in GO
Genes
Species
H. Sapiens
M. musculus
R. norvegicus
G. gallus
D. rerio
D. melanogaster
C. elegans
D. discoideum
S. pombe
S. cerevisiae
A. thaliana
E. coli
C. albicans
Species
Biological Process
Molecular Function
Cellular Component